miRBase entry: tca-mir-3892

Stem-loop tca-mir-3892


Accession
MI0016390
Description
Tribolium castaneum tca-mir-3892 precursor miRNA


Sequence

auuucguuAACCCCUGGUGGAAAACCCauacauuuguuuAAGUGUGGUUAAUUCACAUUGGGGGCauaauaauuc
..........((((((((((((...((((((..........))))))....))).)))))))))...........

Structure
-auuucguuAA         -   -AAC      auuu 
           CCCCUGGUG GAA    CCauac    g
           ||||||||| |||    ||||||     
           GGGGGUUAC CUU    GGUGUG    u
cuuaauaauaC         A   AAUU      AAuu 


Annotation confidence Not enough data
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Genome context
ChLG5: 14781729-14781803 [+]

Database links

Mature tca-miR-3892-5p

Accession MIMAT0018884
Description Tribolium castaneum tca-miR-3892-5p mature miRNA
Sequence 9 - AACCCCUGGUGGAAAACCC - 27
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-3892-3p

Accession MIMAT0018885
Description Tribolium castaneum tca-miR-3892-3p mature miRNA
Sequence 40 - AAGUGUGGUUAAUUCACAUUGGGGGC - 65
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696