miRBase entry: tca-mir-3894

Stem-loop tca-mir-3894


Accession
MI0016393
Description
Tribolium castaneum tca-mir-3894 precursor miRNA


Sequence

ugaaauuugcGGUUUUAAUUCCAUAAUGCAgacgauuuuuacgacggcggaacgugaGCGGUUUAUUGGAAUUAAUUguaaacaaaa
.....((((((((..((((((((...(((..(((.((((..(...)..)))))))..)))......)))))))))))))))).....

Structure
ugaaa        UU        ---UAA   Ag   a    ua g 
     uuugcGGU  UAAUUCCA      UGC  acg uuuu  c  
     ||||||||  ||||||||      |||  ||| ||||  | a
     aaaugUUA  AUUAAGGU      GCG  ugc aagg  g  
aaaac        --        UAUUUG   ag   -    cg c 


Annotation confidence Not enough data
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Genome context
ChLG7: 9418908-9418994 [-]

Database links

Mature tca-miR-3894-5p

Accession MIMAT0018890
Description Tribolium castaneum tca-miR-3894-5p mature miRNA
Sequence 11 - GGUUUUAAUUCCAUAAUGCA - 30
Evidence experimental
SOLID [1]

Mature tca-miR-3894-3p

Accession MIMAT0018891
Description Tribolium castaneum tca-miR-3894-3p mature miRNA
Sequence 58 - GCGGUUUAUUGGAAUUAAUU - 77
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696