miRBase entry: smr-mir-282

Stem-loop smr-mir-282


Accession
MI0016440
Description
Strigamia maritima smr-mir-282 precursor miRNA
Gene family
MIPF0000150; mir-282

Literature search
1 open access papers mention smr-mir-282
(1 sentences)

Sequence

gaaccggcauuguauuAAGCCUCUCCCAGGCUUAGUCUguuuguuuuaauuggacugaguccgagaguggcaacauacauuguuggauuu
...((((((.(((((...(((.(((.(.(((((((((((.(((...))).))))))))))).).))).)))...))))).))))))....

Structure
-gaa      u     uAA   U   C A           u   u 
    ccggca uguau   GCC CUC C GGCUUAGUCUg uug  
    |||||| |||||   ||| ||| | ||||||||||| ||| u
    gguugu acaua   cgg gag g cugagucaggu aau  
uuua      u     caa   u   a c           u   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smr-miR-282

Accession MIMAT0018915
Description Strigamia maritima smr-miR-282 mature miRNA
Sequence 17 - AAGCCUCUCCCAGGCUUAGUCU - 38
Evidence not_experimental

References

  1. PubMed ID: 20702459
    A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata
    "Rota-Stabelli O, Campbell L, Brinkmann H, Edgecombe GD, Longhorn SJ, Peterson KJ, Pisani D, Philippe H, Telford MJ"
    "Proc Biol Sci (2011) 278:298-306