miRBase entry: smr-mir-965

Stem-loop smr-mir-965


Accession
MI0016441
Description
Strigamia maritima smr-mir-965 precursor miRNA
Gene family
MIPF0000708; mir-965

Literature search
1 open access papers mention smr-mir-965
(1 sentences)

Sequence

aacuggugguugccuagagggagaagcuguacaggcuaugauucguacguaucaagucgacaUAAGCGUAUGGCUUUUCCCCUaggagacuaaaccaacu
...((((((((.(((((.((((((((((((((..((((((..(((.((.......)))))))).)))))))))))))))))))))).))))..))))...

Structure
aac    --    g     a              ag   -   au   u  gu 
   uggu  gguu ccuag gggagaagcuguac  gcu aug  ucg ac  a
   ||||  |||| ||||| ||||||||||||||  ||| |||  ||| ||  u
   acca  ucag ggaUC CCCUUUUCGGUAUG  CGA Uac  agc ug  c
uca    aa    a     -              --   A   --   -  aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smr-miR-965

Accession MIMAT0018916
Description Strigamia maritima smr-miR-965 mature miRNA
Sequence 63 - UAAGCGUAUGGCUUUUCCCCU - 83
Evidence not_experimental

References

  1. PubMed ID: 20702459
    A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata
    "Rota-Stabelli O, Campbell L, Brinkmann H, Edgecombe GD, Longhorn SJ, Peterson KJ, Pisani D, Philippe H, Telford MJ"
    "Proc Biol Sci (2011) 278:298-306