miRBase entry: isc-mir-276

Stem-loop isc-mir-276


Accession
MI0016443
Description
Ixodes scapularis isc-mir-276 precursor miRNA
Gene family
MIPF0000124; mir-276


Sequence

aggggaagucgcgcuaucgcgagcgggguacggaggucuuacugugagcgucaagccagcUAGGAACUUCAUACCAUGCUCgcuauggcagacgacacgu
.......((((((((((.(((((((.((((.((((.((((((((...((.....))))).))))).)))).)))).))))))).))))).).))))....

Structure
aggggaa    - -     c       g    c    g     -   uga  g 
       gucg c gcuau gcgagcg ggua ggag ucuua cug   gc u
       |||| | ||||| ||||||| |||| |||| ||||| |||   || c
       cagc g cggua cgCUCGU CCAU CUUC AGGAU gac   cg a
---ugca    a a     u       A    A    A     c   ---  a 


Annotation confidence Not enough data
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Genome context
DS848078: 34710-34809 [-]

Database links

Mature isc-miR-276

Accession MIMAT0018919
Description Ixodes scapularis isc-miR-276 mature miRNA
Sequence 61 - UAGGAACUUCAUACCAUGCUC - 81
Evidence not_experimental

References

  1. PubMed ID: 20702459
    A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata
    "Rota-Stabelli O, Campbell L, Brinkmann H, Edgecombe GD, Longhorn SJ, Peterson KJ, Pisani D, Philippe H, Telford MJ"
    "Proc Biol Sci (2011) 278:298-306