miRBase entry: gma-MIR4344

Stem-loop gma-MIR4344


Accession
MI0016473
Description
Glycine max gma-MIR4344 precursor miRNA
Gene family
MIPF0001152; MIR4374


Sequence

uuaagacagugcuuaccucaacaacgucuuugaAAGUAGACAUUCUAAGACGUUGCUgauauaagcaccgucuuaaaaugcguacuuucaaagacguugcugauguaagcaccguuuuu
..(((((.((((((((.(((.(((((((((((((((((..((((.(((((((.((((......)))).))))))).))))..))))))))))))))))).))).)))))))).))))).

Structure
uu     a        c   a                 GA    C       U    ga 
  aagac gugcuuac uca caacgucuuugaAAGUA  CAUU UAAGACG UGCU  u
  ||||| |||||||| ||| |||||||||||||||||  |||| ||||||| ||||   
  uuuug cacgaaug agu guugcagaaacuuucau  guaa auucugc acga  a
-u     c        u   c                 gc    a       c    au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr18: 19606858-19606976 [-]

Database links

Mature gma-miR4344

Accession MIMAT0018232
Description Glycine max gma-miR4344 mature miRNA
Sequence 34 - AAGUAGACAUUCUAAGACGUUGCU - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14