miRBase entry: gma-MIR4392

Stem-loop gma-MIR4392


Accession
MI0016546
Description
Glycine max gma-MIR4392 precursor miRNA


Sequence

acacuuccgagucauauuuucgcauagaaaagccaccgaacaggaacuuguuacauaccaaggaucgaucggaaguuuuuuucUCUGCGAAAAUGUGAUUUCGGAacugu
(((.((((((((((((((((((((.((((((((..((((...((..((((........))))..))..))))..))..)))))).))))))))))))).))))))).)))

Structure
   c       -             u      --  ca    aca  aa    uua 
aca uuccgag ucauauuuucgca agaaaa  gc  ccga   gg  cuug   c
||| ||||||| ||||||||||||| ||||||  ||  ||||   ||  ||||    
ugu aAGGCUU AGUGUAAAAGCGU Ucuuuu  ug  ggcu   cu  gaac   a
   c       U             C      uu  aa    -ag  ag    cau 


Annotation confidence Not enough data
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Genome context
chr9: 49977292-49977401 [+]

Database links

Mature gma-miR4392

Accession MIMAT0018305
Description Glycine max gma-miR4392 mature miRNA
Sequence 84 - UCUGCGAAAAUGUGAUUUCGGA - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14