miRBase entry: gma-MIR4394

Stem-loop gma-MIR4394


Accession
MI0016550
Description
Glycine max gma-MIR4394 precursor miRNA


Sequence

uugccuccuuucucuuugguccauuuuagugugaaaaaacaaggagucucccauauacacacugaAAUGGACUAAAGAGAAAGGGGCCGg
..(((.(((((((((((((((((((((((((((.........(((...)))......))))))))))))))))))))))))))))))...

Structure
-uu   u                           aaaaaacaa   g 
   gcc ccuuucucuuugguccauuuuagugug         gga  
   ||| |||||||||||||||||||||||||||         ||| u
   CGG GGAAAGAGAAAUCAGGUAAagucacac         ccu  
gGC   -                           ---auauac   c 


Annotation confidence Not enough data
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Genome context
chr10: 20498009-20498098 [-]

Database links

Mature gma-miR4394

Accession MIMAT0018309
Description Glycine max gma-miR4394 mature miRNA
Sequence 66 - AAUGGACUAAAGAGAAAGGGGCCG - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14