miRBase entry: hsa-mir-548y

Stem-loop hsa-mir-548y


Accession
MI0016595
Symbol
HGNC: MIR548Y
Description
Homo sapiens hsa-mir-548y precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
41 open access papers mention hsa-mir-548y
(141 sentences)

Sequence

867 reads, 88 reads per million, 48 experiments
gccuaaacuauuagguuggugcAAAAGUAAUCACUGUUUUUGCCauuacucucaguggcaaaaaccgugauuacuuuugcaccaaccuaguaacaccuucacuguggggg
........((((((((((((((((((((((((((.((((((((((((......)))))))))))).))))))))))))))))))))))))))...((((((...))))))

Structure
----------gccuaaac                          U            ac 
                  uauuagguuggugcAAAAGUAAUCAC GUUUUUGCCauu  u
                  |||||||||||||||||||||||||| ||||||||||||   
                  augauccaaccacguuuucauuagug caaaaacgguga  c
gggggugucacuuccaca                          c            cu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr14: 47760995-47761104 [-]

Disease association
hsa-mir-548y is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-548y

Accession MIMAT0018354
Description Homo sapiens hsa-miR-548y mature miRNA
Sequence 23 - AAAAGUAAUCACUGUUUUUGCC - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20498841
    Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers
    Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH
    PLoS One (2010) 5:e10563