miRBase entry: hsa-mir-3943

Stem-loop hsa-mir-3943


Accession
MI0016600
Symbol
HGNC: MIR3943
Description
Homo sapiens hsa-mir-3943 precursor miRNA
Gene family
MIPF0001400; mir-3943

Literature search
1 open access papers mention hsa-mir-3943
(1 sentences)

Sequence

243 reads, 10 reads per million, 23 experiments
cacacagacggcagcugcggccUAGCCCCCAGGCUUCACUUGGCGuggacaacuugcuaaguaaaguggggggugggccacggcuggcuccuaccuggac
.........(.((((((.((((((.(((((..((((.((((((((.(.....).)))))))).))))))))).)))))).)))))).)(((.....))).

Structure
---cacacagac g      c      G     AG    C        u g 
            g cagcug ggccUA CCCCC  GCUU ACUUGGCG g a
            | |||||| |||||| |||||  |||| |||||||| | c
            c gucggc ccgggu ggggg  ugaa ugaaucgu c a
cagguccauccu g      a      g     --    a        u a 


Annotation confidence Not enough data
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Genome context
chr7: 43150895-43150994 [+]

Database links

Mature hsa-miR-3943

Accession MIMAT0018359
Description Homo sapiens hsa-miR-3943 mature miRNA
Sequence 23 - UAGCCCCCAGGCUUCACUUGGCG - 45
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20498841
    Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers
    Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH
    PLoS One (2010) 5:e10563