Stem-loop ssc-mir-378-2

Accession

MI0016622

Description

Sus scrofa ssc-mir-378-2 precursor miRNA

Literature search

20 open access papers mention ssc-mir-378-2
(98 sentences)

Sequence

75 reads, 21 reads per million, 11 experiments

gugggccuccugaaggcaggcagaaccauugggugaaaagagcACUGGACUUGGAGUCAGAAGGCccg
..((((((.((((...((((........((.((((.......)))).))))))...)))).)))))).

Structure

gu      c    agg    cagaacca  g    aa 
  gggccu cuga   cagg        uu ggug  a
  |||||| ||||   ||||        || ||||  a
  ccCGGA GACU   GUUC        AG UCAc  g
-g      A    GAG    --------  G    ga 

Annotation confidence Low

Genome context

chr12: 38396700-38396767 [+]

Mature ssc-miR-378

• Accession: MIMAT0013868
• Description: Sus scrofa ssc-miR-378 mature miRNA
• Sequence: 44 - ACUGGACUUGGAGUCAGAAGGC - 65
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 20180025
   Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue
   "Cho IS, Kim J, Seo HY, Lim DH, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS"
   "Mol Biol Rep (2010) 37:3567-3574


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100