Stem-loop hsa-mir-550b-2

Accession

MI0016687

Symbol

HGNC: MIR550B2

Description

Homo sapiens hsa-mir-550b-2 precursor miRNA

Literature search

11 open access papers mention hsa-mir-550b-2
(23 sentences)

Sequence

1106 reads, 4.0 reads per million, 144 experiments

agagacucgcuggagauGUGCCUGAGGGAGUAAGAcacuaucugacaacaacagggcUCUUACUCCCUCAGGCACugcaccagccagcaaagcauca
.....((.(((((....((((((((((((((((((.....((((.......))))..))))))))))))))))))....))))).))..........

Structure

-----agaga  c     agau                  cacua    ac 
          cu gcugg    GUGCCUGAGGGAGUAAGA     ucug  a
          || |||||    ||||||||||||||||||     ||||  a
          ga cgacc    CACGGACUCCCUCAUUCU     ggac  c
acuacgaaac  c     acgu                  ---cg    aa 

Annotation confidence High

Genome context

chr7: 32732981-32733077 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-550b-2

Disease association

hsa-mir-550b-2 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-550b-2-5p

• Accession: MIMAT0022737
• Description: Homo sapiens hsa-miR-550b-2-5p mature miRNA
• Sequence: 18 - GUGCCUGAGGGAGUAAGA - 35
• Evidence: not_experimental

Mature hsa-miR-550b-3p

• Accession: MIMAT0018445
• Description: Homo sapiens hsa-miR-550b-3p mature miRNA
• Sequence: 58 - UCUUACUCCCUCAGGCAC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20459774
   Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
   Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
   BMC Biol (2010) 8:58