Stem-loop hsa-mir-548aa-1

Accession

MI0016689

Symbol

HGNC: MIR548AA1

Description

Homo sapiens hsa-mir-548aa-1 precursor miRNA

Literature search

56 open access papers mention hsa-mir-548aa-1
(170 sentences)

Sequence

2327 reads, 16 reads per million, 72 experiments

cuuuauuagucuggugcaaaagaaacugugguuuuugccauuacuuuuacaggcAAAAACCACAAUUACUUUUGCACCAaccuaauauaacuuguuu
...((((((..(((((((((((.((.(((((((((((((............))))))))))))).)).)))))))))))..))))))..........

Structure

-------cuu      uc           a  c             auuac 
          uauuag  uggugcaaaag aa ugugguuuuugcc     u
          ||||||  ||||||||||| || |||||||||||||      
          auaauc  ACCACGUUUUC UU ACACCAAAAAcgg     u
uuuguucaau      ca           A  A             acauu 

Annotation confidence Not enough data

Genome context

chr8: 123348034-123348130 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-548aa-1

Mature hsa-miR-548aa

• Accession: MIMAT0018447
• Description: Homo sapiens hsa-miR-548aa mature miRNA
• Sequence: 55 - AAAAACCACAAUUACUUUUGCACCA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20459774
   Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
   Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
   BMC Biol (2010) 8:58