miRBase entry: oar-mir-370

Stem-loop oar-mir-370


Accession
MI0016915
Description
Ovis aries oar-mir-370 precursor miRNA
Gene family
MIPF0000167; mir-370

Literature search
5 open access papers mention oar-mir-370
(7 sentences)

Sequence

143 reads, 72 reads per million, 11 experiments
gucuggggcacaaggcagagaagcCAGGUCACGUCUCUGCAGUUACaccgcucucgaguGCCUGCUGGGGUGGAACCUGGUCUgucugucugucuagcaccacagc
..((((((((((.((((((.(.(((((((..((((((.((((...(((((....)).))).)))).))))))..))))))).).)))))))))...)).)).))).

Structure
gu   -  -  ---   a      g a       CA      U    UUA   -  c 
  cug gg gc   aca ggcaga a gcCAGGU  CGUCUC GCAG   Cac cg u
  ||| || ||   ||| |||||| | |||||||  |||||| ||||   ||| ||  
  gac cc cg   ugu cugucu U UGGUCCA  GUGGGG CGUC   Gug gc c
-c   a  a  auc   -      g C       AG      U    --C   a  u 


Annotation confidence Not enough data
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Genome context
chr18: 64412683-64412788 [+]

Database links

Mature oar-miR-370-5p

Accession MIMAT0019243
Description Ovis aries oar-miR-370-5p mature miRNA
Sequence 25 - CAGGUCACGUCUCUGCAGUUAC - 46
Evidence experimental
Illumina [1]

Mature oar-miR-370-3p

Accession MIMAT0019244
Description Ovis aries oar-miR-370-3p mature miRNA
Sequence 60 - GCCUGCUGGGGUGGAACCUGGUCU - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20944086
    Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
    "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
    "Genome Res (2010) 20:1651-1662