Stem-loop oar-mir-376d

Accession

MI0016934

Description

Ovis aries oar-mir-376d precursor miRNA

Sequence

7969 reads, 1812 reads per million, 13 experiments

gggauccauccuguuugguauuuaaaagguagauuuuccuucuaugguuacggguuuggugauuaAUCAUAGAGGAAAAUCCACAUuuucaguaucaaaugcugcuuugg
((((....))))((((((((((.((((.((.(((((((((.(((((((((...(((....))))))))))))))))))))).)).)))).))))))))))..........

Structure

gggauccauccu          u    g  a         u         cgg   u 
            guuugguauu aaaa gu gauuuuccu cuaugguua   guu g
            |||||||||| |||| || ||||||||| |||||||||   |||  
            uaaacuauga uuuU CA CUAAAAGGA GAUACUAau   uag g
--gguuucgucg          c    A  C         -         ---   u 

Annotation confidence Low

Genome context

chr18: 64538218-64538327 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from oar-mir-376d

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662