miRBase entry: oar-mir-376b

Stem-loop oar-mir-376b


Accession
MI0016936
Description
Ovis aries oar-mir-376b precursor miRNA
Gene family
MIPF0000091; mir-368

Literature search
1 open access papers mention oar-mir-376b
(1 sentences)

Sequence

9937 reads, 2164 reads per million, 13 experiments
cgucuuucuuugguauuuaaaaGGUGGAUAUUCCUUCUAUGUUUacgugauucauagauaAUCAUAGAGGAAAAUCCAUGUuuucaguaucaaaugcuacucugga
........(((((((((.((((.((((((.(((((.(((((.(((.(((...)))...))).)))))))))).)))))).)))).)))))))))............

Structure
----cgucuuuc         u    G      A     U     U   --c   a 
            uuugguauu aaaa GUGGAU UUCCU CUAUG UUa   gug  
            ||||||||| |||| |||||| ||||| ||||| |||   ||| u
            aaacuauga uuuU UACCUA AAGGA GAUAC Aau   uac  
aggucucaucgu         c    G      A     -     U   aga   u 


Annotation confidence High
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Genome context
chr18: 64538600-64538705 [+]
Clustered miRNAs
18 other miRNAs are < 10 kb from oar-mir-376b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-miR-376b-5p

Accession MIMAT0019284
Description Ovis aries oar-miR-376b-5p mature miRNA
Sequence 23 - GGUGGAUAUUCCUUCUAUGUUU - 44
Evidence experimental
Illumina [1]

Mature oar-miR-376b-3p

Accession MIMAT0019285
Description Ovis aries oar-miR-376b-3p mature miRNA
Sequence 61 - AUCAUAGAGGAAAAUCCAUGU - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20944086
    Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
    "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
    "Genome Res (2010) 20:1651-1662