Stem-loop oar-mir-376b

Accession

MI0016936

Description

Ovis aries oar-mir-376b precursor miRNA

Literature search

1 open access papers mention oar-mir-376b
(1 sentences)

Sequence

9937 reads, 2062 reads per million, 13 experiments

cgucuuucuuugguauuuaaaaGGUGGAUAUUCCUUCUAUGUUUacgugauucauagauaAUCAUAGAGGAAAAUCCAUGUuuucaguaucaaaugcuacucugga
........(((((((((.((((.((((((.(((((.(((((.(((.(((...)))...))).)))))))))).)))))).)))).)))))))))............

Structure

----cgucuuuc         u    G      A     U     U   --c   a 
            uuugguauu aaaa GUGGAU UUCCU CUAUG UUa   gug  
            ||||||||| |||| |||||| ||||| ||||| |||   ||| u
            aaacuauga uuuU UACCUA AAGGA GAUAC Aau   uac  
aggucucaucgu         c    G      A     -     U   aga   u 

Annotation confidence High

Genome context

chr18: 64538600-64538705 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from oar-mir-376b

Mature oar-miR-376b-5p

• Accession: MIMAT0019284
• Description: Ovis aries oar-miR-376b-5p mature miRNA
• Sequence: 23 - GGUGGAUAUUCCUUCUAUGUUU - 44
• Evidence: experimental ; Illumina [1]

Mature oar-miR-376b-3p

• Accession: MIMAT0019285
• Description: Ovis aries oar-miR-376b-3p mature miRNA
• Sequence: 61 - AUCAUAGAGGAAAAUCCAUGU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662