Stem-loop oar-mir-655

Accession

MI0016944

Description

Ovis aries oar-mir-655 precursor miRNA

Sequence

266 reads, 38 reads per million, 13 experiments

aacuguucagggauauuugaggAGAGGUUAUCCGUGUUAUGUUCgcuuggcucaucaugaAUAAUACAUGGUUAACCUCUCUuugaauaucaaacucugccucgagg
...........(((((((((((((((((((.((((((..((((((..((......))))))))..)))))).)))))))))))))))))))...(((......))).

Structure

-----aacuguucagg                   U      UA      cu  gc 
                gauauuugaggAGAGGUUA CCGUGU  UGUUCg  ug  u
                ||||||||||||||||||| ||||||  ||||||  ||   
                cuauaaguuUCUCUCCAAU GGUACA  AUAagu  ac  c
ggagcuccgucucaaa                   U      UA      --  ua 

Annotation confidence Medium

Genome context

chr18: 64546384-64546490 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from oar-mir-655

Mature oar-miR-655-5p

• Accession: MIMAT0019300
• Description: Ovis aries oar-miR-655-5p mature miRNA
• Sequence: 23 - AGAGGUUAUCCGUGUUAUGUUC - 44
• Evidence: experimental ; Illumina [1]

Mature oar-miR-655-3p

• Accession: MIMAT0019301
• Description: Ovis aries oar-miR-655-3p mature miRNA
• Sequence: 61 - AUAAUACAUGGUUAACCUCUCU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662