miRBase entry: mmu-mir-28c

Stem-loop mmu-mir-28c


Accession
MI0016966
Symbol
MGI: Mir28c
Description
Mus musculus mmu-mir-28c precursor miRNA
Gene family
MIPF0000057; mir-28

Literature search
18 open access papers mention mmu-mir-28c
(145 sentences)

Sequence

649 reads, 50 reads per million, 71 experiments
ucacugcaguuacaaagacaaaugagauaugaucccuacccuugAGGAGCUCACAGUCUAUUGAacacaagcagc
...((((.(((.(((((((...((((......((((.......).))).))))..)))).))))))....)))).

Structure
uca    ---a   a   -    aaa    auauga   - ua 
   cugc    guu caa agac   ugag      ucc c  c
   ||||    ||| ||| ||||   ||||      ||| |  c
   gacg    caA GUU UCUG   ACUC      AGG g  c
--c    aaca   -   A    -AC    -----G   A uu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr15: 53614205-53614279 [-]

Database links

Mature mmu-miR-28c

Accession MIMAT0019339
Description Mus musculus mmu-miR-28c mature miRNA
Sequence 45 - AGGAGCUCACAGUCUAUUGA - 64
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20935160
    Next-generation sequencing identifies the natural killer cell microRNA transcriptome
    "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
    "Genome Res (2010) 20:1590-1604