Stem-loop mmu-mir-1843b

Accession

MI0016971

Symbol

MGI: Mir1843b

Description

Mus musculus mmu-mir-1843b precursor miRNA

Gene family

MIPF0001119; mir-1843

Literature search

2 open access papers mention mmu-mir-1843b
(8 sentences)

Sequence

49396 reads, 158 reads per million, 98 experiments

caacAUGGAGGUCUCUGUCUGACUUaggauagcuggcuaaguCCGAUCGUUCCCCUCCAUACaacc
....(((((((...(.(((.(((((((.........))))))).))).)....)))))))......

Structure

--caac       -UCU U   U       gau 
      AUGGAGG    C GUC GACUUag   a
      |||||||    | ||| |||||||   g
      UACCUCC    G UAG Cugaauc   c
ccaaCA       CCUU C   C       ggu 

Annotation confidence High

Genome context

chr1: 159340358-159340423 [+]

Mature mmu-miR-1843b-5p

• Accession: MIMAT0019345
• Description: Mus musculus mmu-miR-1843b-5p mature miRNA
• Sequence: 5 - AUGGAGGUCUCUGUCUGACUU - 25
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-1843b-3p

• Accession: MIMAT0019346
• Description: Mus musculus mmu-miR-1843b-3p mature miRNA
• Sequence: 43 - CCGAUCGUUCCCCUCCAUAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20935160
   Next-generation sequencing identifies the natural killer cell microRNA transcriptome
   "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
   "Genome Res (2010) 20:1590-1604