Stem-loop mmu-mir-378b

Accession

MI0016973

Symbol

MGI: Mir378b

Description

Mus musculus mmu-mir-378b precursor miRNA

Literature search

77 open access papers mention mmu-mir-378b
(745 sentences)

Sequence

126752 reads, 330 reads per million, 95 experiments

uguccugggcuaucccaguccaggcaguacccucaggaggcagguacgauggauagagagggaaccCUGGACUUGGAGUCAGAAGAccugag
.(((...(((..(((.((((((((..((.(((((......((.......))......))))).)))))))))).))))))....))).....

Structure

----u   -cug   ua   c        ca  a     aggagg  gg 
     guc    ggc  ucc aguccagg  gu cccuc      ca  u
     |||    |||  ||| ||||||||  || |||||      ||  a
     cAG    CUG  AGG UCAGGUCc  ca gggag      gu  c
gaguc   AAGA   --   U        --  a     agauag  ag 

Annotation confidence Low

Genome context

chr11: 88352773-88352864 [+]

Mature mmu-miR-378b

• Accession: MIMAT0019348
• Description: Mus musculus mmu-miR-378b mature miRNA
• Sequence: 67 - CUGGACUUGGAGUCAGAAGA - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20935160
   Next-generation sequencing identifies the natural killer cell microRNA transcriptome
   "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
   "Genome Res (2010) 20:1590-1604