miRBase entry: mmu-mir-3968

Stem-loop mmu-mir-3968


Accession
MI0016977
Symbol
MGI: Mir3968
Description
Mus musculus mmu-mir-3968 precursor miRNA

Literature search
3 open access papers mention mmu-mir-3968
(6 sentences)

Sequence

45 reads, 49437 reads per million, 16 experiments
acgccgagcguguggugguaggauccguguagcaccgucuguguguuguugugccacacagagaacuugagCGAAUCCCACUCCAGACACCAugaguagg
...((..((.(((((((((.((((.(((.........((((((((.........))))))))........))).)))).))......))))))).)).))

Structure
acg  ga  g       ------  a    c   guagcaccg        uug 
   cc  gc uguggug      gu ggau cgu         ucugugug   u
   ||  || |||||||      || |||| |||         ||||||||   u
   gg  ug guACCAC      CA CCUA GCg         agacacac   g
---  -a  a       AGACCU  C    A   -aguucaag        cgu 


Annotation confidence Not enough data
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Genome context
chr11: 115447961-115448060 [-]

Database links

Mature mmu-miR-3968

Accession MIMAT0019352
Description Mus musculus mmu-miR-3968 mature miRNA
Sequence 72 - CGAAUCCCACUCCAGACACCA - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20935160
    Next-generation sequencing identifies the natural killer cell microRNA transcriptome
    "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
    "Genome Res (2010) 20:1590-1604