miRBase entry: mmu-mir-28b

Stem-loop mmu-mir-28b


Accession
MI0016979
Symbol
MGI: Mir28b
Description
Mus musculus mmu-mir-28b precursor miRNA

Literature search
18 open access papers mention mmu-mir-28b
(145 sentences)

Sequence

22 reads, 9 reads per million, 14 experiments
gacuauagaaaAGGAGCUCACAAUCUAUUUAGuggcaggcgcacacugccagaaugugugaggcaucuuaauagugugcu
.(((((....((((.(((((((...(((((..((((((.......)))))))))))))))).)).)))).))))).....

Structure
----g     agaa    A  -     AUC     AG      gc 
     acuau    aAGG GC UCACA   UAUUU  uggcag  g
     |||||    |||| || |||||   |||||  ||||||  c
     ugaua    uucu cg agugu   guaag  accguc  a
ucgug     ---a    a  g     ---     --      ac 


Annotation confidence Not enough data
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Genome context
chr8: 73016512-73016591 [+]

Database links

Mature mmu-miR-28b

Accession MIMAT0019354
Description Mus musculus mmu-miR-28b mature miRNA
Sequence 12 - AGGAGCUCACAAUCUAUUUAG - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20935160
    Next-generation sequencing identifies the natural killer cell microRNA transcriptome
    "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
    "Genome Res (2010) 20:1590-1604