miRBase entry: mmu-mir-3971

Stem-loop mmu-mir-3971


Accession
MI0016981
Symbol
MGI: Mir3971
Description
Mus musculus mmu-mir-3971 precursor miRNA

Literature search
1 open access papers mention mmu-mir-3971
(1 sentences)

Sequence

aucugggcuuggcagguggaaugggagguggcagggagaaggcaguuuuccCUCCCCACCCCUGUACCAGUGAagcggaaagg
..((..((((.((...(((.(((((.(((((.((((((((.....))))))))..)))))))))).))))).))))....)).

Structure
au  --gg    g  agg   a     a     -c        g 
  cu    gcuu gc   ugg auggg ggugg  agggagaa g
  ||    |||| ||   ||| ||||| |||||  |||||||| c
  ga    cgaA UG   ACC UGUCC CCACC  UCccuuuu a
-g  aagg    G  ---   A     -     CC        g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr11: 75551429-75551511 [+]

Database links

Mature mmu-miR-3971

Accession MIMAT0019356
Description Mus musculus mmu-miR-3971 mature miRNA
Sequence 52 - CUCCCCACCCCUGUACCAGUGA - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20935160
    Next-generation sequencing identifies the natural killer cell microRNA transcriptome
    "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
    "Genome Res (2010) 20:1590-1604