Stem-loop sequence mmu-mir-3473b

Accession

MI0016997 (change log)

Symbol

MGI:Mir3473b

Description

Mus musculus miR-3473b stem-loop

Gene family

MIPF0001230; mir-3473

Literature search

9 open access papers mention mmu-mir-3473b
(188 sentences)

Stem-loop

                       --       
5' cugagccaucucuccagccc  aagauu 
   ||||||||||||||||||||  ||||| a
3' gacucgguagagaggucggg  uuuugg 
                       aa       

Deep sequencing

56034 reads, 553 reads per million, 136 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr10: 41670739-41670793 [+]
• Overlapping transcripts:

  antisense

  ENSMUST00000099932 ; Ccdc162-202; intron 1

  ENSMUST00000019955 ; Ccdc162-201; intron 1

Database links

• EntrezGene:Mir3473b
• MGI:Mir3473b
• RNAcentral:URS000075AD58_10090
• miRBase Tracker:MI0016997

Mature sequence mmu-miR-3473b

• Accession: MIMAT0020367
• Sequence: 36 - gggcuggagagauggcucag - 55
• Deep sequencing: 55696 reads, 103 experiments
• Evidence: experimental; cloned [1]
• Database links:
  • RNAcentral:URS00003B027C_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-3473b
  • miRDB:mmu-miR-3473b

References

1. PMID:20933514 "The small RNA expression profile of the developing murine urinary and reproductive systems" Aguilar AL, Piskol R, Beitzinger M, Zhu JY, Kruspe D, Aszodi A, Moser M, Englert C, Meister G FEBS Lett. 584:4426-4434(2010).