miRBase entry: hsa-mir-3198-2

Stem-loop hsa-mir-3198-2


Accession
MI0017335
Symbol
HGNC: MIR3198-2
Description
Homo sapiens hsa-mir-3198-2 precursor miRNA
Gene family
MIPF0001216; mir-3198

Literature search
1 open access papers mention hsa-mir-3198-2
(1 sentences)

Sequence

110 reads, 20 reads per million, 32 experiments
gacucugcucucacuguucacccagcacuagcaguaccagaugguucuGUGGAGUCCUGGGGAAUGGAGAgagcacaguc
((((.(((((((.((((((.(((((.(((.((((.(((....))).))))..))).))))))))))).))))))).))))

Structure
    c       a      a     c   -a    u   a 
gacu ugcucuc cuguuc cccag acu  gcag acc g
|||| ||||||| |||||| ||||| |||  |||| |||  
cuga acgagAG GGUAAG GGGUC UGA  UGuc ugg a
    c       A      -     C   GG    u   u 


Annotation confidence Not enough data
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Genome context
chr12: 54231397-54231476 [-]

Database links

Mature hsa-miR-3198

Accession MIMAT0015083
Description Homo sapiens hsa-miR-3198 mature miRNA
Sequence 49 - GUGGAGUCCUGGGGAAUGGAGA - 70
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685

  2. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86