miRBase entry: dme-mir-4912

Stem-loop dme-mir-4912


Accession
MI0017694
Description
Drosophila melanogaster dme-mir-4912 precursor miRNA


Sequence

14 reads, 6 reads per million, 10 experiments
GUGAGUAGUCGUAUGUUUAUUAAgauuuacuuucuauaaauuaauguccacuacuuuuag
..(((((((.((((((((((..(((.......)))))))))..))).).)))))))....

Structure
--GU       C -   --      UA   uu 
    GAGUAGU G UAU  GUUUAU  Aga  u
    ||||||| | |||  ||||||  |||  a
    uucauca c gua  uaaaua  ucu  c
gauu       c u   au      --   uu 


Annotation confidence Not enough data
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Genome context
chr2L: 4829980-4830039 [-]

Database links

Mature dme-miR-4912-5p

Accession MIMAT0020505
Description Drosophila melanogaster dme-miR-4912-5p mature miRNA
Sequence 1 - GUGAGUAGUCGUAUGUUUAUUAA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177960
    Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
    "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
    "Genome Res (2011) 21:286-300