miRBase entry: dme-mir-4943

Stem-loop dme-mir-4943


Accession
MI0017729
Description
Drosophila melanogaster dme-mir-4943 precursor miRNA


Sequence

69 reads, 12 reads per million, 13 experiments
uucggaucguuugaaugaccaauuuugucUUUUAUUUUCUCUGUGUUUUCAguuaaugaaagauagUGAACACAGUGCUAAAUGAAAGAuaaugagacccagucgacaggacccaag
...((.((.(((((.((.......(((((((((((((.(.((((((((...(((.......)))...)))))))).)..))))))))))))).......)).)))).).)).))...

Structure
uuc  a  g -    a  accaauu             -U U        UCA   aa 
   gg uc u uuga ug       uugucUUUUAUUU  C CUGUGUUU   guu  u
   || || | |||| ||       |||||||||||||  | ||||||||   |||  g
   cc ag a agcu ac       aauAGAAAGUAAA  G GACACAAG   uag  a
gaa  c  g c    g  ccagagu             UC U        Uga   aa 


Annotation confidence Not enough data
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Genome context
chr2L: 16528375-16528491 [-]

Database links

Mature dme-miR-4943-5p

Accession MIMAT0020151
Description Drosophila melanogaster dme-miR-4943-5p mature miRNA
Sequence 30 - UUUUAUUUUCUCUGUGUUUUCA - 51
Evidence experimental
Illumina [1]

Mature dme-miR-4943-3p

Accession MIMAT0020152
Description Drosophila melanogaster dme-miR-4943-3p mature miRNA
Sequence 67 - UGAACACAGUGCUAAAUGAAAGA - 89
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215