Stem-loop dme-mir-4954

Accession

MI0017740

Description

Drosophila melanogaster dme-mir-4954 precursor miRNA

Sequence

10 reads, 3 reads per million, 9 experiments

uuggcgcuuggaaucgAUACCCGAGCCAUGAUAGAUUGaagucaacccaaUCGAUCGCGGUUCGAGUGCUCgagucuugugcgccggcaug
.((((((..(((.(((((((.((((((.((((.(((((.........))))).)))).)))))).))).)))).)))...)))))).....

Structure

----u      -uu   a    -   C      A    A     aag 
     uggcgc   gga ucgA UAC CGAGCC UGAU GAUUG   u
     ||||||   ||| |||| ||| |||||| |||| |||||   c
     gccgcg   ucu agCU GUG GCUUGG GCUA CUaac   a
guacg      ugu   g    C   A      C    G     cca 

Annotation confidence Not enough data

Genome context

chrX: 2029004-2029094 [-]

Mature dme-miR-4954-5p

• Accession: MIMAT0020169
• Description: Drosophila melanogaster dme-miR-4954-5p mature miRNA
• Sequence: 17 - AUACCCGAGCCAUGAUAGAUUG - 38
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4954-3p

• Accession: MIMAT0020170
• Description: Drosophila melanogaster dme-miR-4954-3p mature miRNA
• Sequence: 51 - UCGAUCGCGGUUCGAGUGCUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215