miRBase entry: dme-mir-4956

Stem-loop dme-mir-4956


Accession
MI0017742
Description
Drosophila melanogaster dme-mir-4956 precursor miRNA


Sequence

39 reads, 10 reads per million, 21 experiments
agggggcggcaacaugugccaccugccgcCGAUGGCCAGCAACAACUCGCUgaauaaucucuGCGGAUUGUCGCUGGGCAGCGGugguagugaugaucucaugaacgauccucgggc
.(((((((....((((...((((((((((((.((.(((((.((((.((((.((......)).)))).)))).))))).)).))))))))).).))....))))..)).)))))....

Structure
---a     -  gcaa    -ugc  - -         A  G     A    C    U  au 
    ggggg cg    caug    ca c cugccgcCG UG CCAGC ACAA UCGC ga  a
    ||||| ||    ||||    || | ||||||||| || ||||| |||| |||| ||   
    cuccu gc    guac    gu g gaugguGGC AC GGUCG UGUU GGCG cu  a
cggg     a  --aa    ucua  a u         G  G     C    A    u  cu 


Annotation confidence Not enough data
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Genome context
chrX: 7085737-7085853 [-]

Database links

Mature dme-miR-4956-5p

Accession MIMAT0020173
Description Drosophila melanogaster dme-miR-4956-5p mature miRNA
Sequence 30 - CGAUGGCCAGCAACAACUCGCU - 51
Evidence experimental
Illumina [1]

Mature dme-miR-4956-3p

Accession MIMAT0020174
Description Drosophila melanogaster dme-miR-4956-3p mature miRNA
Sequence 63 - GCGGAUUGUCGCUGGGCAGCGG - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215