miRBase entry: dme-mir-4967

Stem-loop dme-mir-4967


Accession
MI0017753
Description
Drosophila melanogaster dme-mir-4967 precursor miRNA

Literature search
1 open access papers mention dme-mir-4967
(1 sentences)

Sequence

8 reads, 1 reads per million, 6 experiments
cuauagcguugucucuugcgcaaauUGCAUUUUCUCUCUGUUAACauguacacauaauuccugUAACAAAGGGCAUUUGCAAUGUgugagucagcaaaccgcauccg
.....(((((((..((((((((..(((((..(.((((.(((((.((.(...........).))))))).)))).)..)))))))))))))...))))..))).....

Structure
cuaua   --    -cu        aa     UU U    C     A  u uaca 
     gcg  uugu   cuugcgca  uUGCA  U CUCU UGUUA Ca g    c
     |||  ||||   ||||||||  |||||  | |||| ||||| || |    a
     cgc  aacg   gagugUGU  AACGU  A GGGA ACAAU gu c    u
gccua   ca    acu        --     UU C    A     -  c uuaa 


Annotation confidence Not enough data
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Genome context
chr2R: 10012093-10012199 [-]

Database links

Mature dme-miR-4967-5p

Accession MIMAT0020192
Description Drosophila melanogaster dme-miR-4967-5p mature miRNA
Sequence 26 - UGCAUUUUCUCUCUGUUAAC - 45
Evidence experimental
Illumina [1]

Mature dme-miR-4967-3p

Accession MIMAT0020193
Description Drosophila melanogaster dme-miR-4967-3p mature miRNA
Sequence 64 - UAACAAAGGGCAUUUGCAAUGU - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215