miRBase entry: dme-mir-4973

Stem-loop dme-mir-4973


Accession
MI0017759
Description
Drosophila melanogaster dme-mir-4973 precursor miRNA


Sequence

35 reads, 12 reads per million, 17 experiments
cucguucAGUCGUCGUUGCGUGUUGUAGguggccuggucuacugagcuccguuuggacugcuccuccuccaacuacuacugcggccgcugcugcugcugcugcggcugcugcauccgccugcaaccUGCAACACUCACACCACGGCAAcag
........(((((.((((.(((((((((((.((..(((.....(((((((....)))..))))................((((((.(((((.((....)).))))).))))))...))).)).))))))))))).)).)).))))).....

Structure
cucguucA     C  -  C           g  cu   cuacugagcuccguuuggacugcuccuccuccaacuacuac      c     u  u 
        GUCGU GU UG GUGUUGUAGgu gc  ggu                                         ugcggc gcugc gc g
        ||||| || || ||||||||||| ||  |||                                         |||||| ||||| ||  
        CGGCA CA AC CACAACGUcca cg  ccg                                         acgucg cggcg cg c
---gacAA     C  C  U           a  -u   --------------------------------------ccu      u     u  u 


Annotation confidence Not enough data
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Genome context
chr2L: 20562298-20562448 [+]

Database links

Mature dme-miR-4973-5p

Accession MIMAT0020201
Description Drosophila melanogaster dme-miR-4973-5p mature miRNA
Sequence 8 - AGUCGUCGUUGCGUGUUGUAG - 28
Evidence experimental
Illumina [1]

Mature dme-miR-4973-3p

Accession MIMAT0020202
Description Drosophila melanogaster dme-miR-4973-3p mature miRNA
Sequence 127 - UGCAACACUCACACCACGGCAA - 148
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215