miRBase entry: dme-mir-4982

Stem-loop dme-mir-4982


Accession
MI0017768
Description
Drosophila melanogaster dme-mir-4982 precursor miRNA

Literature search
1 open access papers mention dme-mir-4982
(1 sentences)

Sequence

5 reads, 4 reads per million, 5 experiments
ccaacuuugcuggcauucgguggccaauaAUGCAAUUGCAUGUCCUUGUUgcuguugcaauguugcAGCUGGAAUUGCAAUUGCAUUUcuaguugccgcugcugcugcucgaguggcaa
(((.(((.((.((((..(((((((.(((((((((((((((..(((..(((((............))))).)))..))))))))))))....)))))))))).))))))..))))))...

Structure
---   a   -u  u    uu       c   ----            UG   UU     uguug 
   cca cuu  gc ggca  cgguggc aau    aAUGCAAUUGCA  UCC  GUUgc     c
   ||| |||  || ||||  ||||||| |||    ||||||||||||  |||  |||||      
   ggu gag  cg ucgu  gucgccg uug    UUACGUUAACGU  AGG  CGAcg     a
aac   -   cu  -    -c       -   aucU            UA   -U     uugua 


Annotation confidence Not enough data
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Genome context
chr2R: 18720169-18720287 [+]

Database links

Mature dme-miR-4982-5p

Accession MIMAT0020215
Description Drosophila melanogaster dme-miR-4982-5p mature miRNA
Sequence 30 - AUGCAAUUGCAUGUCCUUGUU - 50
Evidence experimental
Illumina [1]

Mature dme-miR-4982-3p

Accession MIMAT0020216
Description Drosophila melanogaster dme-miR-4982-3p mature miRNA
Sequence 67 - AGCUGGAAUUGCAAUUGCAUUU - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215