miRBase entry: dme-mir-4984

Stem-loop dme-mir-4984


Accession
MI0017770
Description
Drosophila melanogaster dme-mir-4984 precursor miRNA

Literature search
1 open access papers mention dme-mir-4984
(1 sentences)

Sequence

121 reads, 6 reads per million, 25 experiments
cuucgcucgaggugugaaaaccuuuuggccAGCGAAUACGCCUCGGAUCCAAUCAcguuucaagaucgaggugAAUUCUUUGACGUAUUCGCUGGccaaaugacacguucgccauguuuugcg
...(((..((.(((((((.....(((((((((((((((((.(..(((.....((((.((........)).))))..)))..).))))))))))))))))).......)))).))).))..)))

Structure
cuu   uc  g   -    --aaccu                 C UC   UCCAA    g  uca 
   cgc  ga gug ugaa       uuuggccAGCGAAUACG C  GGA     UCAc uu   a
   |||  || ||| ||||       ||||||||||||||||| |  |||     |||| ||    
   gcg  uu uac gcuu       aaaccGGUCGCUUAUGC G  UCU     Agug ag   g
---   uu  g   c    gcacagu                 A UU   ---UA    g  cua 


Annotation confidence Not enough data
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Genome context
chr2L: 8141540-8141662 [-]

Database links

Mature dme-miR-4984-5p

Accession MIMAT0020219
Description Drosophila melanogaster dme-miR-4984-5p mature miRNA
Sequence 31 - AGCGAAUACGCCUCGGAUCCAAUCA - 55
Evidence experimental
Illumina [1]

Mature dme-miR-4984-3p

Accession MIMAT0020220
Description Drosophila melanogaster dme-miR-4984-3p mature miRNA
Sequence 74 - AAUUCUUUGACGUAUUCGCUGG - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215