miRBase entry: dme-mir-4986

Stem-loop dme-mir-4986


Accession
MI0017772
Description
Drosophila melanogaster dme-mir-4986 precursor miRNA

Literature search
1 open access papers mention dme-mir-4986
(2 sentences)

Sequence

11 reads, 6 reads per million, 6 experiments
uucugccgcuuuugcuguggcuucucugcaUGGGAUUCCCCAUUCUGCAUGGCgccgaucucugccagcCCAUCGGAUGGCGGAACUUCCagugcagcgaggucgcuucucugcaggaucug
((((((.((....)).((((((((.((((((((((((((((((.(((.((((.((.(........).))))))))))))).)))).))))).))))).))))))))......))))))....

Structure
----      cgcuuuugcu        u     -     -    -    U   C    C  c auc 
    uucugc          guggcuuc cugca UGGGA UUCC CCAU CUG AUGG gc g   u
    ||||||          |||||||| ||||| ||||| |||| |||| ||| |||| || |    
    aggacg          cgcuggag gacgu aCCUU AAGG GGUA GGC UACC cg c   c
gucu      ----ucucuu        c     g     C    C    -   -    -  a cgu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3L: 9733659-9733780 [-]

Database links

Mature dme-miR-4986-5p

Accession MIMAT0020223
Description Drosophila melanogaster dme-miR-4986-5p mature miRNA
Sequence 31 - UGGGAUUCCCCAUUCUGCAUGGC - 53
Evidence experimental
Illumina [1]

Mature dme-miR-4986-3p

Accession MIMAT0020224
Description Drosophila melanogaster dme-miR-4986-3p mature miRNA
Sequence 70 - CCAUCGGAUGGCGGAACUUCC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215