miRBase entry: dme-mir-4987

Stem-loop dme-mir-4987


Accession
MI0017773
Description
Drosophila melanogaster dme-mir-4987 precursor miRNA


Sequence

32 reads, 27 reads per million, 18 experiments
gcggugccguugaugaugacacagcgcgcUUGCAACAGCGUGCGGCACGAUUcucacagcagggcuccagcucggccaaaaaaUCGGUCGUCGCCAUUGCAAGCucaccguuuggucucaccacggccaaga
((((((.(((((.((....))))))).((((((((..(((.(((((.(((((......((.((((....)))).)).....)))))))))))))..)))))))).))))))((((((.......))))))..

Structure
---------------------      ccguugaugaugacacagcgc        CA   U     A     cucaca  a    u 
                     gcggug                     gcUUGCAA  GCG GCGGC CGAUU      gc gggc c
                     ||||||                     ||||||||  ||| ||||| |||||      || ||||  
                     ugccac                     CGAACGUU  CGC UGCUG GCUaa      cg cucg c
agaaccggcaccacucugguu      --------------------u        AC   -     -     -aaaac  g    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2L: 10840345-10840476 [-]

Database links

Mature dme-miR-4987-5p

Accession MIMAT0020225
Description Drosophila melanogaster dme-miR-4987-5p mature miRNA
Sequence 30 - UUGCAACAGCGUGCGGCACGAUU - 52
Evidence experimental
Illumina [1]

Mature dme-miR-4987-3p

Accession MIMAT0020226
Description Drosophila melanogaster dme-miR-4987-3p mature miRNA
Sequence 84 - UCGGUCGUCGCCAUUGCAAGC - 104
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215