Stem-loop sequence egr-let-7

AccessionMI0017774 (change log)
DescriptionEchinococcus granulosus let-7 stem-loop
Gene family MIPF0000002; let-7
Literature search

2 open access papers mention egr-let-7
(18 sentences)

Stem-loop 
   -u    a       -        uuu  a     u   g 
5'   gcug caaugug agguagug   cg auguc cug c
     |||| ||||||| ||||||||   || ||||| |||  
3'   cggc guuauac ucuaucac   gc uacag gau a
   cg    -       g        uuu  c     c   c
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000098.1: 276822-276898 [+]
intergenic
Database links

Mature sequence egr-let-7-5p

Accession MIMAT0020227
Sequence

12 -  

ugagguaguguuucgaaugucu

 - 33

Get sequence
Evidence experimental; cloned [1], Illumina [2]

Mature sequence egr-let-7-3p

Accession MIMAT0037418
Sequence

46 -  

acauccguuucacuaucugcaua

 - 68

Get sequence
Evidence experimental; Illumina [2]

References

1
PMID:21219906 "Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes" Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M Int J Parasitol. 41:439-448(2011).
2
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).