Stem-loop egr-let-7

Accession

MI0017774

Description

Echinococcus granulosus egr-let-7 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

2 open access papers mention egr-let-7
(18 sentences)

Sequence

ugcugacaaugUGAGGUAGUGUUUCGAAUGUCUcuggcacuagcgACAUCCGUUUCACUAUCUGCAUAuugcggcgc
.((((.(((((((((((((((...((.(((((.(((....))).))))).))...)))))))).)))))))))))..

Structure

-u    a       -        UUU  A     U   g 
  gcug caaugUG AGGUAGUG   CG AUGUC cug c
  |||| ||||||| ||||||||   || ||||| |||  
  cggc guuAUAC UCUAUCAC   GC UACAg gau a
cg    -       G        UUU  C     c   c 

Annotation confidence Not enough data

Genome context

APAU02000098.1: 276822-276898 [+]

Mature egr-let-7-5p

• Accession: MIMAT0020227
• Description: Echinococcus granulosus egr-let-7-5p mature miRNA
• Sequence: 12 - UGAGGUAGUGUUUCGAAUGUCU - 33
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-let-7-3p

• Accession: MIMAT0037418
• Description: Echinococcus granulosus egr-let-7-3p mature miRNA
• Sequence: 46 - ACAUCCGUUUCACUAUCUGCAUA - 68
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83