Stem-loop egr-mir-1

Accession

MI0017775

Description

Echinococcus granulosus egr-mir-1 precursor miRNA

Gene family

MIPF0000038; mir-1

Literature search

1 open access papers mention egr-mir-1
(5 sentences)

Sequence

gcuucccaauaggccauagaguaagucccuacaccuauggggaucuaUGGAAUGUUGUGAAGUAUGU
(((((.(((((..(((((((.....((((((......)))))))))))))..))))).)))))....

Structure

----     c     gg       guaag      ca 
    gcuuc caaua  ccauaga     ucccua  c
    ||||| |||||  |||||||     ||||||   
    UGAAG GUUGU  GGUaucu     aggggu  c
UGUA     U     AA       -----      au 

Annotation confidence Not enough data

Genome context

APAU02000107.1: 117513-117579 [+]

Mature egr-miR-1-5p

• Accession: MIMAT0020228
• Description: Echinococcus granulosus egr-miR-1-5p mature miRNA
• Sequence: 48 - UGGAAUGUUGUGAAGUAUGU - 67
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83