Stem-loop sequence egr-mir-2a

AccessionMI0017776 (change log)
DescriptionEchinococcus granulosus miR-2a stem-loop
Gene family MIPF0000049; mir-2
Literature search

1 open access papers mention egr-mir-2a
(2 sentences)

Stem-loop 
   cuuc   c    cuac        --   a     g      c 
5'     gaa cucc    guuccagg  ggg uguga uuuaua a
       ||| ||||    ||||||||  ||| ||||| |||||| g
3'     cuu gagg    caagguuc  ccc acacu aaguau c
   --uc   c    aaac        gu   g     -      c
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000019.1: 574317-574400 [+]
intergenic
Database links

Mature sequence egr-miR-2a-5p

Accession MIMAT0037419
Sequence

16 -  

cguuccagggggaugugaguuua

 - 38

Get sequence
Evidence experimental; Illumina [2]

Mature sequence egr-miR-2a-3p

Accession MIMAT0020229
Sequence

50 -  

aaucacagcccugcuuggaacc

 - 71

Get sequence
Evidence experimental; cloned [1], Illumina [2]

References

1
PMID:21219906 "Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes" Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M Int J Parasitol. 41:439-448(2011).
2
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).