miRBase entry: egr-mir-7

Stem-loop egr-mir-7


Accession
MI0017779
Description
Echinococcus granulosus egr-mir-7 precursor miRNA
Gene family
MIPF0000022; mir-7

Literature search
2 open access papers mention egr-mir-7
(5 sentences)

Sequence

cauugcuuuugUGGAAGACUGGUGAUAUGUUGUaaagcuccccuaccauaCAGCGUAUCGCAGUUUUUCCCUaaaaacauu
...((.(((((.(((((((((.((((((((((((..(........)..))))))))))))))).)))))).))))).))..

Structure
cau  c     U      -   G            aa cuc 
   ug uuuug GGAAGA CUG UGAUAUGUUGUa  g   c
   || ||||| |||||| ||| ||||||||||||  |    
   ac aaaaU CCUUUU GAC GCUAUGCGACau  c   c
-uu  a     C      U   -            ac auc 


Annotation confidence Not enough data
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Genome context
APAU02000012.1: 579477-579557 [-]

Database links

Mature egr-miR-7-5p

Accession MIMAT0020233
Description Echinococcus granulosus egr-miR-7-5p mature miRNA
Sequence 12 - UGGAAGACUGGUGAUAUGUUGU - 33
Evidence experimental
cloned [1], Illumina [2]

Mature egr-miR-7-3p

Accession MIMAT0037421
Description Echinococcus granulosus egr-miR-7-3p mature miRNA
Sequence 51 - CAGCGUAUCGCAGUUUUUCCCU - 72
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 21219906
    Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
    "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
    "Int J Parasitol (2011) 41:439-448

  2. PubMed ID: 25656283
    microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
    Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
    Parasit Vectors (2015) 8:83