Stem-loop sequence egr-mir-87

AccessionMI0017784 (change log)
DescriptionEchinococcus granulosus miR-87 stem-loop
Gene family MIPF0000152; mir-87
Literature search

1 open access papers mention egr-mir-87
(1 sentences)

Stem-loop 
   c      uc         ga     aguuauu       -u     a  u 
5'  caccug  auuuugcuc  accag       cuuggcg  caucc uc c
    ||||||  |||||||||  |||||       |||||||  ||||| ||  
3'  guggac  ugaaacgag  ugguu       ggaucgu  guagg ag u
   u      uu         --     -------       uu     a  c
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000009.1: 962338-962429 [-]
intergenic
Database links

Mature sequence egr-miR-87-5p

Accession MIMAT0020238
Previous IDsegr-miR-87*
Sequence

1 -  

ccaccugucauuuugcucgaacc

 - 23

Get sequence
Evidence experimental; cloned [1], Illumina [2]

Mature sequence egr-miR-87-3p

Accession MIMAT0020239
Previous IDsegr-miR-87
Sequence

73 -  

gugagcaaaguuucaggugu

 - 92

Get sequence
Evidence experimental; cloned [1]

References

1
PMID:21219906 "Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes" Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M Int J Parasitol. 41:439-448(2011).
2
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).