miRBase entry: egr-mir-124b

Stem-loop egr-mir-124b


Accession
MI0017786
Description
Echinococcus granulosus egr-mir-124b precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
3 open access papers mention egr-mir-124b
(5 sentences)

Sequence

gugaauuugGUAUUCUACGCGAUGUCUUGGUAcgaguugacacUAAGGCACGCGGUGAAUACCaaggucc
..((.((((((((((..((((.(((((((((..........)))))))))))))..)))))))))).)).

Structure
gu  a          UA    A         Acga 
  ga uuugGUAUUC  CGCG UGUCUUGGU    g
  || ||||||||||  |||| |||||||||     
  cu gaaCCAUAAG  GCGC ACGGAAUca    u
-c  g          UG    -         cagu 


Annotation confidence Not enough data
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Genome context
APAU02000030.1: 412342-412411 [-]

Database links

Mature egr-miR-124b-5p

Accession MIMAT0020241
Description Echinococcus granulosus egr-miR-124b-5p mature miRNA
Sequence 10 - GUAUUCUACGCGAUGUCUUGGUA - 32
Evidence experimental
cloned [1], Illumina [2]

Mature egr-miR-124b-3p

Accession MIMAT0020242
Description Echinococcus granulosus egr-miR-124b-3p mature miRNA
Sequence 44 - UAAGGCACGCGGUGAAUACC - 63
Evidence experimental
cloned [1], Illumina [2]

References

  1. PubMed ID: 21219906
    Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
    "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
    "Int J Parasitol (2011) 41:439-448

  2. PubMed ID: 25656283
    microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
    Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
    Parasit Vectors (2015) 8:83