Stem-loop sequence egr-mir-219

AccessionMI0017790 (change log)
DescriptionEchinococcus granulosus miR-219 stem-loop
Gene family MIPF0000044; mir-219
Stem-loop 
         c    u      u     u     --cu  ucuc   ua 
5' agugcu ugau guccau cgcau ucuug    gc    gug  c
   |||||| |||| |||||| ||||| |||||    ||    |||  a
3' ucauga gcua cgggua gugug agaac    cg    cac  a
         c    -      u     u     uucu  ---u   uu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000015.1: 1031605-1031691 [-]
intergenic
Database links

Mature sequence egr-miR-219-5p

Accession MIMAT0020246
Sequence

8 -  

ugauuguccauucgcauuucuug

 - 30

Get sequence
Evidence experimental; cloned [1], Illumina [2]

Mature sequence egr-miR-219-3p

Accession MIMAT0037430
Sequence

61 -  

agauguguguaugggcaucgca

 - 82

Get sequence
Evidence experimental; Illumina [2]

References

1
PMID:21219906 "Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes" Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M Int J Parasitol. 41:439-448(2011).
2
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).