miRBase entry: gma-MIR164b

Stem-loop gma-MIR164b


Accession
MI0017826
Description
Glycine max gma-MIR164b precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
17 open access papers mention gma-MIR164b
(37 sentences)

Sequence

gcuccuuguUGGAGAAGCAGGGCACGUGCaacucucuaggcucucuuaagcgccauugaacccuuugcacgugcuccccuucuccaacac
......(((((((((((..((((((((((((...((..(((.((....)).)))...)).....))))))))))))..))))))))))).

Structure
gcuccu           CA            --cuc  -ua   u  c 
      uguUGGAGAAG  GGGCACGUGCaa     uc   ggc cu u
      |||||||||||  ||||||||||||     ||   ||| ||  
      acaaccucuuc  cucgugcacguu     ag   ccg ga u
-----c           cc            uccca  uua   c  a 


Annotation confidence Not enough data
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Genome context
chr10: 1558481-1558570 [+]

Database links

Mature gma-miR164b

Accession MIMAT0020975
Description Glycine max gma-miR164b mature miRNA
Sequence 10 - UGGAGAAGCAGGGCACGUGC - 29
Evidence experimental
454 [1], Illumina [2]

References

  1. PubMed ID: 21504877
    MicroRNAs in the shoot apical meristem of soybean
    "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
    "J Exp Bot (2011) 62:2495-2506

  2. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153