Stem-loop gma-MIR319d

Accession

MI0017842

Description

Glycine max gma-MIR319d precursor miRNA

Gene family

MIPF0000010; MIR159

Literature search

17 open access papers mention gma-MIR319d
(42 sentences)

Sequence

agagugaaggagcuuccuuuagcccacacaugguuaggggauuaaaggguugcugaaguaucugcugacucauucauacacauagaauagugauucaaauugcuaagguaauugugugaaugaagcaggggacauuuugcauccuucuuucuaugugcuUGGACUGAAGGGGAGCUCCUUCuuucuguug
((((.(((((((((((((((((.((((((((((..(((.......(((((.((.(((((.(((.(((..(((((((((((..((...(((((((....)))))))...))..)))))))))))..))).))).)))))))))))))))..)))))))..))).))))).)))))))))))).))))....

Structure

----    u            -     c   --       uu   ggauuaa     u  u     a   g   ac           ca  gaa       u 
    agag gaaggagcuucc uuuag cca  cacaugg  agg       agggu gc gaagu ucu cug  ucauucauaca  ua   uagugau c
    |||| |||||||||||| ||||| |||  |||||||  |||       ||||| || ||||| ||| |||  |||||||||||  ||   |||||||  
    ucuu CUUCCUCGAGGG AAGUC GGU  guguauc  ucu       uccua cg uuuua agg gac  aguaagugugu  au   aucguua a
guug    u            G     A   uc       uu   -------     -  -     c   g   ga           ua  gga       a 

Annotation confidence Not enough data

Genome context

chr15: 40974346-40974535 [-]

Mature gma-miR319d

• Accession: MIMAT0020992
• Description: Glycine max gma-miR319d mature miRNA
• Sequence: 160 - UGGACUGAAGGGGAGCUCCUUC - 181
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506