Stem-loop gma-MIR4997

Accession

MI0017863

Description

Glycine max gma-MIR4997 precursor miRNA

Gene family

MIPF0001334; MIR4997

Sequence

aagcggggagacaucgcggcagaagaaauccuGAUCGUCAAGCGCGAAGAUGAGGucgaccaugugacacauucucacgucaucacagacaucauaaugaaugauuuucauguuuauauuuaaauuaguuguuauauguuugucauuugaauuugacacuuaauuuguucaaauuuauacuuacauacaacaaauuuaaacagagacaugaaaaucauucauuaugauauccgugaugacgugaggauaugucacauggucgaucccaucuucgcgccugacgaucagaauuuauucugcugcgaugucuccccgcuucuacuugcucaa
((((((((((((((((((((((((.((((.((((((((((.(((((((((((.((((((((((((((((.((((((((((((((((.((.(((((((((((((((((((((((((...((((((((.(((((...((((..((....(((((((((.((.......))))))))))).))..))))))))).))))))))...))))))))))))))))))))))))).)).)))))))))))))))).)))))))))))))))).))))))))))).)))))))))).)))).))))))))))))))))))))))))............

Structure

------------                        g    c          A           A                c                a  c                         aua        a     uau    uu  cauu         c  uu 
            aagcggggagacaucgcggcagaa aaau cuGAUCGUCA GCGCGAAGAUG GGucgaccaugugaca auucucacgucaucac ga aucauaaugaaugauuuucauguuu   uuuaaauu guugu   augu  gu    ugaauuuga ac  a
            |||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||   |||||||| |||||   ||||  ||    ||||||||| ||  a
            uucgccccucuguagcgucgucuu uuua gacuagcagu cgcgcuucuac cuagcugguacacugu uaggagugcaguagug cu uaguauuacuuacuaaaaguacaga   aaauuuaa caaca   uaca  ca    auuuaaacu ug  u
aacucguucauc                        a    a          c           c                a                c  a                         gac        a     ---    uu  ---u         -  uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature gma-miR4997

• Accession: MIMAT0021015
• Description: Glycine max gma-miR4997 mature miRNA
• Sequence: 33 - GAUCGUCAAGCGCGAAGAUGAGG - 55
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506