miRBase entry: hsa-mir-5004

Stem-loop hsa-mir-5004


Accession
MI0017870
Symbol
HGNC: MIR5004
Description
Homo sapiens hsa-mir-5004 precursor miRNA


Sequence

29 reads, 5 reads per million, 18 experiments
ggcacuugcuuggggguuagUGAGGACAGGGCAAAUUCACGAgauuggguugugcagaggcugacaCUUGGAUUUUCCUGGGCCUCAGgacuuccuuucagacaugg
(((....))).(((((((..(((((.(((((.(((((((.(.(.((((.((......)).))))).).))))))))))))..))))).)))))))............

Structure
-ggcacuugcuu       ag     -A     C       C A a    g  gu 
            ggggguu  UGAGG  CAGGG AAAUUCA G g uugg uu  g
            |||||||  |||||  ||||| ||||||| | | |||| ||   
            ccuucag  ACUCC  GUCCU UUUAGGU C c aguc ga  c
gguacagacuuu       -G     GG     -       U a -    g  ga 


Annotation confidence High
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Genome context
chr6: 33438331-33438437 [+]

Disease association
hsa-mir-5004 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-5004-5p

Accession MIMAT0021027
Description Homo sapiens hsa-miR-5004-5p mature miRNA
Sequence 21 - UGAGGACAGGGCAAAUUCACGA - 42
Evidence not_experimental
Database links
Predicted targets

Mature hsa-miR-5004-3p

Accession MIMAT0021028
Description Homo sapiens hsa-miR-5004-3p mature miRNA
Sequence 67 - CUUGGAUUUUCCUGGGCCUCAG - 88
Evidence not_experimental

References

  1. PubMed ID: 21558790
    Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis
    "Hansen TB, Kjems J, Bramsen JB"
    "RNA Biol (2011) 8:378-383