miRBase entry: ath-MIR5013

Stem-loop ath-MIR5013


Accession
MI0017881
Description
Arabidopsis thaliana ath-MIR5013 precursor miRNA


Sequence

ggaucuguucauaacgaaguuguugggcgauacaucauuuaguagacaaggUUUGUGACAUCUAGGUGCUUUuuuuuuucuucuauaaacaagagcaccuagauaucauaaaccuugucuacuaaaugacaucuaggugcuuguugugcuuacaguucu
(((.((((.((((((.((((..(((((.(.....((((((((((((((((((((((((.((((((((((((((.(((.........))).)))))))))))))).))))))))))))))))))))))))).)))))..))))))))))...)))).)))

Structure
   u    --u      g    ug     c auaca                        C              u   uuc 
gga cugu   cauaac aagu  uuggg g     ucauuuaguagacaaggUUUGUGA AUCUAGGUGCUUUu uuu   u
||| ||||   |||||| ||||  ||||| |     |||||||||||||||||||||||| |||||||||||||| |||   u
ucu gaca   guguug uucg  gaucu c     aguaaaucaucuguuccaaauacu uagauccacgagaa aaa   c
   u    uuc      -    ug     a -----                        a              c   uau 


Annotation confidence Not enough data
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Genome context
chr2: 7166817-7166975 [+]

Database links

Mature ath-miR5013

Accession MIMAT0020517
Description Arabidopsis thaliana ath-miR5013 mature miRNA
Sequence 52 - UUUGUGACAUCUAGGUGCUUU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21357774
    MicroRNA activity in the Arabidopsis male germline
    "Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD"
    "J Exp Bot (2011) 62:1611-1620