Accession
MI0017918
Description
Glycine max
gma-MIR169i precursor miRNA
Gene family
MIPF0001058;
MIR169_6
Literature search
23 open access papers mention gma-MIR169i
(99 sentences)
(99 sentences)
Sequence
auuUGAGCCGGGAUGGCUUGCCGGCAuaugcauaaaaagcaaagauccccuguguggcuugCCGGUGCCAUCCCGUCUCAUAuuugcucccuuuacacacucaugugagacuuugaaaagagcuucauuuacgguauccauugugccuucu
...((((.(((((((((..(((((((..((((((................))))))...)))))))))))))))).)))).....((((..((((....(((....)))....))))..)))).........(((((.....)))))....
...((((.(((((((((..(((((((..((((((................))))))...)))))))))))))))).)))).....((((..((((....(((....)))....))))..)))).........(((((.....)))))....
Structure
--------------------------------------------------------------------auu C UU -ua aaaagca
UGAG CGGGAUGGC GCCGGCA ugcaua a
|||| ||||||||| ||||||| ||||||
ACUC GCCCUACCG UGGCCgu gugugu a
ucuuccguguuaccuauggcauuuacuucgagaaaaguuucagaguguacucacacauuucccucguuuAU U -- ucg ccccuag
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr13: 21505359-21505509 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gma-MIR169i
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gma-miR169i-3p
| Accession | MIMAT0021068 |
| Description | Glycine max gma-miR169i-3p mature miRNA |
| Sequence | 62 - CCGGUGCCAUCCCGUCUCAUA - 82 |
| Evidence |
experimental
SOLiD [1] |
Mature gma-miR169i-5p
| Accession | MIMAT0022983 |
| Description | Glycine max gma-miR169i-5p mature miRNA |
| Sequence | 4 - UGAGCCGGGAUGGCUUGCCGGCA - 26 |
| Evidence |
experimental
Illumina [2] |
References
|
