miRBase entry: hsa-mir-5088

Stem-loop hsa-mir-5088


Accession
MI0017977
Symbol
HGNC: MIR5088
Description
Homo sapiens hsa-mir-5088 precursor miRNA


Sequence

99 reads, 11 reads per million, 28 experiments
cccauCAGGGCUCAGGGAUUGGAUGGAGGugaugggggcaggggaugggucucacccUCCCUUCUUCCUGGGCCCUCAg
......((((((((((((..(((.(((((.(.(((((.(........).))))))))))).)))))))))))))))...

Structure
cccauC            UU   U     u a     g agg 
      AGGGCUCAGGGA  GGA GGAGG g ugggg c   g
      ||||||||||||  ||| ||||| | ||||| |    
      UCCCGGGUCCUU  CUU CCUcc c acucu g   g
---gAC            --   C     - -     g gua 


Annotation confidence Not enough data
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Genome context
chr19: 49682117-49682195 [+]

Disease association
hsa-mir-5088 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-5088-5p

Accession MIMAT0021080
Description Homo sapiens hsa-miR-5088-5p mature miRNA
Sequence 6 - CAGGGCUCAGGGAUUGGAUGGAGG - 29
Evidence experimental
Illumina [1], qPCR [1], meta-analysis [2]

Mature hsa-miR-5088-3p

Accession MIMAT0027041
Description Homo sapiens hsa-miR-5088-3p mature miRNA
Sequence 58 - UCCCUUCUUCCUGGGCCCUCA - 78
Evidence experimental
meta-analysis [2]
Database links
Predicted targets

References

  1. PubMed ID: 21785231
    Detection of novel human MiRNAs responding to X-ray irradiation
    "Ding N, Wu X, He J, Chang L, Hu W, Li W, Wang J, Wang T, Zhou G"
    "J Radiat Res (2011) 52:425-432

  2. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645