miRBase entry: ssc-mir-129b

Stem-loop ssc-mir-129b


Accession
MI0017986
Description
Sus scrofa ssc-mir-129b precursor miRNA
Gene family
MIPF0000073; mir-129

Literature search
4 open access papers mention ssc-mir-129b
(5 sentences)

Sequence

10 reads, 11 reads per million, 6 experiments
cccuuuggauCUUUUUGCGGUCUGGGCUUGCuguuccucucuacaguagucaggaagcccuuaccccaaaaaguaucugcggga
.(((.((((((((((((.(((..((((((.(((..(..((....))..).))).))))))..))).))))))).))))).))).

Structure
c   u     -       C   CU      G   uu cu  c 
 ccu uggau CUUUUUG GGU  GGGCUU Cug  c  cu u
 ||| ||||| ||||||| |||  |||||| |||  |  ||  
 ggg gucua gaaaaac cca  cccgaa gac  g  ga a
a   c     u       c   uu      g   -u au  c 


Annotation confidence Not enough data
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Genome context
chr18: 21181553-21181636 [+]

Database links

Mature ssc-miR-129b

Accession MIMAT0020586
Description Sus scrofa ssc-miR-129b mature miRNA
Sequence 11 - CUUUUUGCGGUCUGGGCUUGC - 31
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  2. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100